Microbiology

 

Microbiology is the study of micro-organisms - usually only visible under a microscope. It is important to know about these as some may cause disease.

 

 

Pathogenic micro-organism

A micro-organism which causes disease

 

 

Non-pathogenic micro-organism

A micro-organism which does not cause disease, live with us as commensals

 

Organisms which do not cause disease in one location may cause disease in another place. Eg.  Coliforms are commensal in the colon but pathogenic in the bladder or blood

Eg. Escherichia coli may cause cystitis or choleycystitis

 

 

Forms of micro-organism

Prion, Virus, Mycoplasma, Bacteria, Protozoa, Fungi, Helminths

 

Prions are self replicating rogue protein molecules

Viruses may use DNA or RNA as their genetic material, they are about 20 – 80 nm in size

Mycoplasma are small simple bacteria and do respond to antibiotics

Bacteria are about 1 micrometer in size and are prokaryotic

Protozoa are eukaryotic

 

Arrange the following infectious diseases under the aetiological organism

 

Tuberculosis, Smallpox, Measles, Mumps, Gastro-enteritis, German measles, Athletes foot, Monilia, Meningitis, Pneumonia, Cold sores, Leprosy, Colds, Influenza, Wound infection, Cystitis, Conjunctivitis, Osteomylitis, Chicken pox, Diphtheria, Whooping cough (pertussis), AIDS, Herpes cold sores, Peptic ulcers, Syphilis, Gonorrhoea, Malaria, Hepatitis, Sore throat, Candida, Pneumocystis, Cholera, Creutzfeld Jakob Disease

 

 

 

Prion             Virus              Mycoplasma            Bacteria               Protozoa                  Fungi

                        Rubella                                               Diptheria

                        Herpes zoster                                    Whooping cough

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Staining of bacteria

Bacteria need to be stained so they may be seen under the microscope

Gram positive   - holds blue stains

Gram negative - does not hold blue stains, these are usually stained red

 

 

Shapes of bacteria

Bacteria may be classified by their shape

Cocci              - spherical

Bacilli              - rod shaped

Vibrio              - curved bacteria

 

 

Groups of bacteria

Staphylococcus         -  grow in clusters

Streptococcus           -  grow in chains

Diplococcus

 

Bacteria and oxygen

Aerobic          - need oxygen to survive

Anaerobic      - are poisoned by oxygen

 

Treatments

Virus               - no treatments for most infections

Bacteria         - antibiotics for most infections

Fungi              - local and systemic anti-fungal drugs

 

Spread of infection

Vector             - any organism which transmits infection

Fomite            - any object which transmits infection

 

Direct contact

Indirect contact

Droplet

Insects

Animals

Body fluids

Faecal-oral

Food and drinks

 

Terms

Epidemic       - increase in incidence of a disease

Pandemic      - world wide epidemic

Endemic         - a disease which is always present

 

Bacterial growth requirements

Temperature – most pathogens like a temperature of 37`C

Water – lack of water can cause spore formation

Substrates

Oxygen for aerobes

Bacterial growth medium

 

 

Bacterial reproduction

Bacteria reproduce by simple cell division, (binary fission)

In optimum conditions bacteria may divide every 20 minutes

Opportunist infections

 

 

 

            MICROBIOLOGY

 

Describe the types of microorganisms

        Virus

        Bacteria

        Mycoplasm

        Protozoa

        Fungi

List common diseases caused by each of the above microorganisms

Define a pathogenic microorganism

Differentiate between:

        Cocci and bacilli

        Gram negative and positive bacteria

        Aerobic and anaerobic organisms

        Staphylococcus and streptococcus

Briefly outline the treatment options for viral, bacterial and fungal infections

State what a vector and a fomite are

Describe the possible means of mirco-organisms between individuals

Discuss what a good bacterial growth medium consists of

State how frequently bacterial numbers can increase given good conditions.

 

Microbiology

Microbiology is the study of micro-organisms – usually they are so small that they are  only visible with the aid of a microscope. It is important to know about these as some may cause disease.

 

Pathogenic micro-organism

A micro-organism which causes disease

 

Non-pathogenic micro-organism

A micro-organism which does not cause disease

 

It is important to know that organisms which do not cause disease in one location may cause disease in another place. Eg.  Coliforms are commensal in the colon but pathogenic in the bladder or blood

 

Micro-organisms that usually populate the human body are called the normal flora; they are commensals, do not harm their host and may even be beneficial.

 

 

CLASSIFICATION OF MICRO-ORGANISMS

 

A         EUCARYOTES           -           microsopic animals

1.                   Protozoa         (unicellular) amoeba, malarial parasites

2.                  Helminths (multicellular) tapeworms, flukes, roundworms

B          EUCARYOTES           -           microsopic plants

1.                   Fungi, e.g. yeasts and moulds

2.                  Algae (all non-pathogenic)  green, brown, red algae

C          PROKARYOTES

1.                   Bacteria (true bacteria) e.g. staphylococci

2.                  Actinomycetes (filamentous bacteria) e.g. Streptomyces

3.                  Rickettsias (parasitic intracellular bacteria

a.                   Rickettsias, e.g. typhus fever

b.                  Chlamydias e.g. psittacosis

4.                  Mycoplasm (bacteria without cell walls e.g. Mycobacterium pneumoniae

5.                  Phototrophic bacteria (produce oxygen in sunlight)

a.                   Cyanobacteria e.g. blue-green algae

b.                  Photosynthetic e.g. purple and purple sulphur bacteria

D         VIRUSES       -           non-cellular micro-organisms, e.g. influenza and poliomyelitis

 

Reference:

Watson, R. (Ed) (1999) Essential Science for Nursing Students, London, Bailliere Tindall.

 

Micro-organisms inhabit almost every type of environment, even the most hostile.  Some micro-organisms are very useful.

A few micro-organisms can cause disease.  We can now effectively treat most infectious disease, we can vaccinate to prevent many others.

 

PROKARYOTIC cells are small and far less complex than eucaryotic cells.  They have no internal skeletal structure, instead the shape of the cell is determined by a rigid cell wall.

 

Bacterial cells have two main shapes:

            Spehiral                      (cocci)

            Rod shaped     (bacilli)

A few species are shaped like curved rods or spirals

 

Arrange the following infectious diseases under the aetiological organism, use the headings in the workbook, adding 1 more heading - prion

Tuberculosis, Smallpox, Measles, Mumps, Gastro-enteritis, German measles, Athletes foot, Monilia, Meningitis, Pneumonia, Cold sores, Leprosy, Colds, Influenza, Wound infection, Cystitis, Conjunctivitis, Osteomylitis, Chicken pox, Diphtheria, Whooping cough, AIDS, Herpes cold sores, Peptic ulcers, Syphilis, Gonorrhea, Malaria, Hepatitis, Sore throat, Candida, Pneumocystis, Cholera, Creutzfeld Jakob Disease

 


MICROBIOLOGY WORKBOOK

1.                Define a pathogenic micro-organism

A micro-organism which causes disease

2.                Describe the following types of micro-organisms:

3.     List common diseases caused by each of these micro-organisms

 

      Virus

Contain genetic material and are able to reproduce.

So tiny can only be seen with an electron microscope

Smallest known infectious agent.

They can grow only within the living cell of the host

Viruses are not usually susceptible to antibiotics.

Cold (Rhinoviruses

Influenza (various strains)

Cold sores

HIV (Human immunodeficiency virus) causes  AIDS (Acquired immune deficiency syndrome)

Chickenpox  (Varicella zoster virus) and shingles (herpes zoster)

Hepatitis

Glandular fever (Infectious mononucleosis)

Measles

Mumps

Poliomyelitis

Rabies

Rubella

Viral encephalitis

Warts and gential warts (HPV – human papillomaviruses)

 

Bacteria     -      1 celled organisms that are a primitive life form.  Staining there cells helps make their structure more visible and reveals information about their properties. 

Found everywhere, their requirements vary greatly. 

Can produce spores, resitant forms that can tolerate long periods of dryness or other adverse conditions. 

Spores are easily airborne and are resistant to ordinary methods of disinfection, particularly dangerous. 

Some bacteria can swim rapidly by having flagella.

Reproduce by binary fusion (simple cell division)

Cause damage in 2 ways:

by producing poisons or toxins

and by entering the body tissues and growing within them.

 

Botulism

Cholera

Dental caries

Brucellosis

Anthrax

Acute bacterial conjunctivitis

Diphtheria

External otitis

Gastritis

Gonorrhoea

Legionnaires’s disease

Chlamydia trachomatis

Menigitis – several different bacteria

Psitticosis

Pelvic inflammatory disease

Whooping cough (Pertussis)

Pneumonia

Rheumatic fever

Salmonella

Shigella, dysentery

Staphylococcal infections

Syphillis

Tetanus

Toxic shock syndrome (Staphylococcus aureus strains)

Trachoma (Chlamydial conjunctivitis)

Typhoid

       Mycoplasm

 Bacteria without cell walls e.g. Mycobacterium pneumonia

 

      Protozoa
Microbes that can be described as animal-like, one celled but much larger than bacteria.

Found in soil, water, moist grass, mud puddles, the sea.

Sporozoa grow in a host, Malaria caused by Plasmodium are carried by a type of mosquito, cause serious illness in the tropis, resulting in up to 3 million deaths each year.

Some protozoa are opportunistic infections e.g. in AIDS

 

Amoeba (dysentry)

Malaria (Anopheles mosquito)

Toxoplasmosis (cat faeces and undercooked meat)

Trichomoniasis (urogenital infection)

Sleeping sickness (tsetse fly)

 

 

       Fungi (also called mycotic conditions)

True fungi are a large group of simple plantlike organisms.

Only a few are pathogenic. 

Larger and more complicated than bacteria, still a simple life form.

Fungi grow best in the dark.

Reproduce in several ways, cell division, producing spores

Aspergillosis

Blastomycosis

Candidiasis

San Joaquin fever

Histoplasmosis

Mycosis (any disease cause by fungi)

Tinea (tinea pedis - athletes foot, tinea cruris – jock itch, tinea corporis –ringworm

 

Prion

Creutzfeld Jakob Disease

Parasitic Worms (helminths)  (can be called infestation)

Round worms,

hookworms,

flatworms

4.     Differentiate between:

       Cocci and bacilli

Shapes of bacteria

Bacteria may be classified by their shape

Cocci                 - spherical

Bacilli                - rod shaped

Vibrio                - curved bacteria

 

       Gram negative and positive bacteria

Staining of bacteria

Bacteria need to be stained so they may be seen under the microscope

Gram positive   - holds blue stains

Gram negative - does not hold blue stains, these are usually stained red

 

       Aerobic and anaerobic organisms

Bacteria and oxygen

Aerobic     - need oxygen to survive

Anaerobic - are poisoned by oxygen

Staphylococcus and streptococcus

Groups of bacteria

Staph                -  grow in clusters

Strep                -  grow in chains

 

5.     State what a vector and a fomite are:

Spread of infection

Vector      - any organism which transmits infection

Fomite      - any object which transmits infection

6.     Describe the possible means of spread of mirco-organisms between individuals:

Direct contact

Indirect contact

Droplet

Insects

Animals

Body fluids

Faecal-oral

Food and drinks

Diagram from OHP – The chain of infection

 

7.     What does a good bacterial growth medium consists of:

Bacterial growth requirements

Temperature

Water

Substrates

Oxygen for aerobes

 

8.     State how frequently bacterial numbers can increase given good conditions.

Bacterial reproduction

Bacteria reproduce by simple cell division

In optimum conditions bacteria may divide every 20 minutes

9.     Briefly outline the treatment options for viral, bacterial and fungal infections

Treatments

Virus                 - no treatments for most infections

Bacteria            - antibiotics for most infections

Fungi                - local and systemic anti-fungal drugs

 

MICROBIOLOGY WORKBOOK

 

1.        Define a pathogenic micro-organism

 

 

2.    Describe the following types of micro-organisms:

 

3.     List common diseases caused by each of these micro-organisms

      Virus

Bacteria

Mycoplasm

 

Protozoa

       Fungi

 

4.     Differentiate between:

       Cocci and bacilli

       Gram negative and positive bacteria

       Aerobic and anaerobic organisms

       Staphylococcus and streptococcus

5.     State what a vector and a fomite are:

6.     Describe the possible means of spread of mirco-organisms between individuals:

Diagram from OHP – The chain of infection

7.     What does a good bacterial growth medium consists of:

8.     State how frequently bacterial numbers can increase given good conditions.

9.     Briefly outline the treatment options for viral, bacterial and fungal infections